“Many Perl chapters are excellent comprehensive and yet easy to read interesting and enjoyable the overall product serves well its purpose as an. Download Citation on ResearchGate | Bioinformatics Biocomputing and Perl: An Introduction to Bioinformatics Computing Skills and Practice. PDF | On Oct 1, , Artem Cherkasov and others published MoorhouseMBarryP: Bioinformatics Biocomputing and Perl.

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Bioinformatids figures in the ‘biological’ sections are not very informative or readable such as Figure The book is concluded with six appendices covering the Linux basics, Perl installation, operators, on-line support and suggested reading materials which, in my mind, benefit the book tremendously.

Several figures in the ‘biological’sections are not very informative or readable such as Fig-ure Permissions Request permission to reuse content from this site.

He has been involved in numerous bioinformatics courses throughout the UK and Netherlands. Thebook is concluded with six appendices covering the Linuxbasics, Perl installation, operators, on-line support andsuggested reading materials which, in my mind, benefitthe book tremendously.

The section ‘Working with Perl’ presents an extended tuto-rial with practical tips and useful references for Perl begin-ners. References Moorhouse M, Barry P.

Bioinformatics, Biocomputing and Perl (Moorhouse) – Wiki

Please review our privacy policy. The authors also acknowledge the open-source nature of Perl and the bioinformatics community and offer on-line support and direct feedback to the readers. The rest is organized into four sections consisting of 18 chapters elaborating on essential bioinformatics tools and skills. Many Perl chapters, such as Perl regular expressions, modular organization, DBI-programming, BioPerl and web-automation, are excellent.

Following bioinfogmatics is ‘Working with Data’, whichfamiliarizes the reader with some public genomic andproteomic databases and discusses important subjects ofdatabase formats, non-redundancy, cross-referencing andprogrammable access, etc. DBI Perl — the primary interface for database program-ming by Perl.


Places to Put Things. An essential textbook for teaching how to apply Perl in the development of Web databases and automating bioinformatics tasks Focuses on learning Perl as a tool then applying it to bioinformatics problems Teaches readers to create their own customized programs to address specific tasks and to manage complex data structures within those programs Each chapter includes an example illustrating the use of material covered in that chapter and exercises to practise Features maxims and technical notes for easy reference.

The Sequence Retrieval System. DBI Perl — the primary interface for database programming by Perl. University of British Columbia Library.

Review on ”Bioinformatics, Biocomputing and Perl” by Michael Moorhouse and Paul Barry

Several sections may be too advancedfor the beginner level such as Perl basics and databasedownloadingwhile others may contain too excessivedetails the Protein Databank section.

There are also certain aspects, in which the book could be further improved. Next, the authors offer Perl-based solutions for remote database access and for creation of WWW-based bioinformatics services using Perl functionalities in ‘Working with the Web’.

Setting the Technological Scene. Working with Data applies the programming skills acquired to processing a variety of bioinformatics data. There are also certain aspects, in which the book could befurther improved. The book would greatly benefit from color illustrations.

It starts with a preface outlining main biolog-ical and technological concepts of the moderncomputational biology.

I am following [an] MSc distance learning course in Bioinformatics XML — Extensible Markup Language — a popular standardfor documents containing structured information. An introduction to the important Bioperl Project concludes this chapter and rounds off the book. Working with Applications shifts gear from creating custom programs to using them.


This is an open-access article distributed under the terms of the Creative Commons Attribution License http: National Center for Biotechnology InformationU.

Bioinformatics, Biocomputing and Perl (Moorhouse)

The book would greatly benefitfrom color illustrations. Received Oct 7; Accepted Oct The book ” BioinformaticsBiocomputing and Perl ” [ 1 ] attempts to encompass those numerous volumes which most bioinformaticians keep on their office bookshelves and which are often entitled as “S omething in a Nutshell “.

A very useful feature of the book is the use of maxims that highlight key points throughout the text. Would you like to change to the site? Several sections may be too advanced for the beginner level such as Perl basics and database downloadingwhile others may contain too excessive details the Protein Databank section. Michael MoorhousePaul Barry. Journal List Biomed Eng Online v. AcePerl — for more info per the home page of the AcePerldeveloper Dr.

Working with Perl presents an extended tutorial introduction to programming through Perl, the premier programming technology of the bioinformatics community. The authors alsoPublish with BioMed Central and every scientist can read your work free of charge”BioMed Central will be the most significant development for disseminating the results of biomedical research bioinformattics our lifetime.

Michael recently completed a Ph. Bioinformatics Biocomputing and Perl.